Antigen

Antigen Class

TFs and others

Antigen

JUN

Cell type

Cell type Class

Gonad

Cell type

BIN-67

NA

NA

Sample

source_name

Bin67 Ovarian Cancer Cell Line

cell line

Bin67

transfected vector

BRG1

antibody

c-Jun

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Samples were processed for CUT&RUN following protocol from https://dx.doi.org/10.17504/protocols.io.zcpf2vn . Antibodies were used at 1:25 dilution . Libraries were construct using Kapa Hyperprep DNA kit and Kapa dual index adapters per manufacturers instructions.

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

40441448

Reads aligned (%)

83.8

Duplicates removed (%)

9.0

Number of peaks

3599 (qval < 1E-05)

hg19

Number of total reads

40441448

Reads aligned (%)

82.9

Duplicates removed (%)

9.5

Number of peaks

3291 (qval < 1E-05)